miRBase entry: tni-mir-19a-2

Stem-loop tni-mir-19a-2


Accession
MI0048322
Description
Tetraodon nigroviridis tni-mir-19a-2 precursor miRNA


Sequence


guccaccuaaacuuuugacaguucucugucAGUUUUGCAUGGUUGCGCUGCaagaagaaauaaguUGUGCAAAUCUAUGCAAAACUGAcagcggucugauuuuccacgccugggucac
....(((((.......(((((.((.(((((((((((((((((((((((.((............)).))))))..))))))))))))))))).)).))).)).........)))))...

Structure
gucc     --aacuuuu  -   u  u                 --      U  aagaa 
    accua         ga cag uc cugucAGUUUUGCAUGG  UUGCGC GC     g
    |||||         || ||| || |||||||||||||||||  |||||| ||      
    ugggu         uu guc gg gacAGUCAAAACGUAUC  AACGUG ug     a
-cac     ccgcaccuu  a   u  c                 UA      U  aauaa 


Annotation confidence Not enough data
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Genome context
2: 12892361-12892418 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from tni-mir-19a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-19a-2-5p

Accession MIMAT0074908
Description Tetraodon nigroviridis tni-miR-19a-2-5p mature miRNA
Sequence 31 - AGUUUUGCAUGGUUGCGCUGC - 51
Evidence not_experimental

Mature tni-miR-19a-2-3p

Accession MIMAT0074907
Description Tetraodon nigroviridis tni-miR-19a-2-3p mature miRNA
Sequence 66 - UGUGCAAAUCUAUGCAAAACUGA - 88
Evidence not_experimental

References