Stem-loop tni-mir-27a

Accession

MI0048311

Description

Tetraodon nigroviridis tni-mir-27a precursor miRNA

Sequence

guguguguguccugaguuugagagaggggcAGGACUUGGCUCGCUCCGUGAACAguucggucagugugagugUUCACAGUGGCUAAGUUCCGCuccucacaagcuuuaccagcgucccaccuc
(((.((((.....(((((((...(((((((.(((((((((.((((..(((((((.((((.......)))))))))))))))))))))))).))))))).))))))).....))).).)))...

Structure

---   u -   guccu       aga       A         U    CC       g    gu 
   gug g ugu     gaguuug   gaggggc GGACUUGGC CGCU  GUGAACA uucg  c
   ||| | |||     |||||||   ||||||| ||||||||| ||||  ||||||| ||||  a
   cac c gcg     uucgaac   cuccuCG CUUGAAUCG GUGA  CACUUgu gagu  g
cuc   c u   accau       --a       C         -    --       -    gu 

Annotation confidence Not enough data

Genome context

15_random: 3094204-3094266 []

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-27a

Mature tni-miR-27a-5p

• Accession: MIMAT0074887
• Description: Tetraodon nigroviridis tni-miR-27a-5p mature miRNA
• Sequence: 31 - AGGACUUGGCUCGCUCCGUGAACA - 54
• Evidence: not_experimental

Mature tni-miR-27a-3p

• Accession: MIMAT0074886
• Description: Tetraodon nigroviridis tni-miR-27a-3p mature miRNA
• Sequence: 73 - UUCACAGUGGCUAAGUUCCGC - 93
• Evidence: not_experimental

References