miRBase entry: tni-mir-462

Stem-loop tni-mir-462


Accession
MI0048276
Description
Tetraodon nigroviridis tni-mir-462 precursor miRNA


Sequence


accugcaucucguuuuggugggugggauggUAACGGAACCCAUAAUGCAGCUGuaauuucagagguccaGCUGGUUAUGGGGUCCGUUUCCaucccacgacgcacagaacaucgggaugguu
.....(((((((((((((((.(((((((((.((((((.((((((((.((((((..............)))))))))))))).)))))).)))))))))..))).))))))...))))))...

Structure
accug      ---      -   -g         U      A        G      uaauuu 
     caucuc   guuuug gug  gugggaugg AACGGA CCCAUAAU CAGCUG      c
     ||||||   |||||| |||  ||||||||| |||||| |||||||| ||||||       
     guaggg   caagac cgc  cacccuaCC UUGCCU GGGUAUUG GUCGac      a
--uug      cua      a   ag         U      G        -      cuggag 


Annotation confidence Not enough data
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Genome context
9: 665421-665482 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-462
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-462-5p

Accession MIMAT0074820
Description Tetraodon nigroviridis tni-miR-462-5p mature miRNA
Sequence 31 - UAACGGAACCCAUAAUGCAGCUG - 53
Evidence not_experimental

Mature tni-miR-462-3p

Accession MIMAT0074821
Description Tetraodon nigroviridis tni-miR-462-3p mature miRNA
Sequence 70 - GCUGGUUAUGGGGUCCGUUUCC - 91
Evidence not_experimental

References