Stem-loop tni-mir-728-2

Accession

MI0048255

Description

Tetraodon nigroviridis tni-mir-728-2 precursor miRNA

Sequence

gugcuucaucggauucuggccccccugaggAAAUGUAGUAGACUAUAAGUAUACGugggucagacugUAUACUAAGUAUACUACGUUUACucaagagcggcgccucguuucugccgccgg
(.((.....((((..(.(((((((.((((..(((((((((.(((...(((((((((.......)).))))))).))).)))))))))..)))).).).)).)))..)..))))..)))..

Structure

-- u  uucau    uu -u   -  - - c    gA         G   AUA       -  gg 
  g gc     cgga  c  ggc cc c c ugag  AAUGUAGUA ACU   AGUAUAC Gu  g
  | ||     ||||  |  ||| || | | ||||  ||||||||| |||   ||||||| ||  u
  c cg     gucu  g  ccg gg g g acuC  UUGCAUCAU UGA   UCAUAUg ca  c
gg -  ---cc    uu cu   c  c a a    AU         A   --A       u  ga 

Annotation confidence Not enough data

Genome context

15: 2762818-2762877 []

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-728-2

Mature tni-miR-728-2-5p

• Accession: MIMAT0074783
• Description: Tetraodon nigroviridis tni-miR-728-2-5p mature miRNA
• Sequence: 31 - AAAUGUAGUAGACUAUAAGUAUACG - 55
• Evidence: not_experimental

Mature tni-miR-728-2-3p

• Accession: MIMAT0074782
• Description: Tetraodon nigroviridis tni-miR-728-2-3p mature miRNA
• Sequence: 68 - UAUACUAAGUAUACUACGUUUAC - 90
• Evidence: not_experimental

References