Accession
MI0048252
Description
Tetraodon nigroviridis
tni-mir-1788 precursor miRNA
Sequence
ucacauugguagacacagucaggcuuuccaGGCUUGUUUUAAGUUGCCUGCGacuuguauuuggacaCAGGCAGCUAAAGCAAGUCUGggacgccacagacacacccucaacccccga
.......(((.((....(((.(((.((((((((((((((((.((((((((.(.((.......)).).)))))))))))))))))))))))).)))...)))......)).))).....
.......(((.((....(((.(((.((((((((((((((((.((((((((.(.((.......)).).)))))))))))))))))))))))).)))...)))......)).))).....
Structure
ucacauu a --caca --a u A C a ug
ggu ga guc ggc uuccaGGCUUGUUUUA GUUGCCUG G cu u
||| || ||| ||| |||||||||||||||| |||||||| | || a
cca cu cag ccg aggGUCUGAACGAAAU CGACGGAC c gg u
--agccc a cccaca aca c - a a uu
Annotation confidence
Not enough data
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Genome context
2: 17694044-17694101 []
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-1788
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-1788-5p
| Accession | MIMAT0074776 |
| Description | Tetraodon nigroviridis tni-miR-1788-5p mature miRNA |
| Sequence | 31 - GGCUUGUUUUAAGUUGCCUGCG - 52 |
| Evidence | not_experimental |
Mature tni-miR-1788-3p
| Accession | MIMAT0074777 |
| Description | Tetraodon nigroviridis tni-miR-1788-3p mature miRNA |
| Sequence | 68 - CAGGCAGCUAAAGCAAGUCUG - 88 |
| Evidence | not_experimental |
References
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