Accession
MI0047256
Description
Sarcophilus harrisii
sha-mir-1a-1 precursor miRNA
Sequence
aucugacaaucaccuagaccuacucagaguACAUACUUCUUUAUGUACCCAUAugaacauauaaugcuaUGGAAUGUAAAGAAGUAUGUAUuuuugguagguaauaaaucaccaagaggga
.................(((((((.(((((((((((((((((((((..(((((..(........)..))))).))))))))))))))))))))).)))))))......((.((....))))
.................(((((((.(((((((((((((((((((((..(((((..(........)..))))).))))))))))))))))))))).)))))))......((.((....))))
Structure
--aucugacaaucaccuag c AC ug aca
accuacu agaguACAUACUUCUUUAUGU CCAUA a u
||||||| ||||||||||||||||||||| ||||| |
uggaugg uuuUAUGUAUGAAGAAAUGUA GGUau u a
agggagaaccacuaaauaa u -A cg aau
Annotation confidence
Not enough data
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Genome context
GL841304.1: 688930-688990 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sha-mir-1a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-1a-1-5p
| Accession | MIMAT0072914 |
| Description | Sarcophilus harrisii sha-miR-1a-1-5p mature miRNA |
| Sequence | 31 - ACAUACUUCUUUAUGUACCCAUA - 53 |
| Evidence | not_experimental |
Mature sha-miR-1a-3p
| Accession | MIMAT0072910 |
| Description | Sarcophilus harrisii sha-miR-1a-3p mature miRNA |
| Sequence | 70 - UGGAAUGUAAAGAAGUAUGUAU - 91 |
| Evidence | not_experimental |
References
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