Accession
MI0047236
Description
Sarcophilus harrisii
sha-mir-18-1 precursor miRNA
Sequence
uguuaugcuggugucaagugcuuuuuguucUAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaucuACUGCCCUAAGUGCUCCUUCUGGCauaagaaguuauguuuucauccaguaauuc
.....((((((((..((..(((((((((.((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..))).)))))))))....))..)).))))))....
.....((((((((..((..(((((((((.((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..))).)))))))))....))..)).))))))....
Structure
uguua - uc --gu u -- U C U A - aa u
ugcugg ug aa gcuuuuugu cUA AGG GCAU UAG GCAG UAG ug g a
|||||| || || ||||||||| ||| ||| |||| ||| |||| ||| || | g
augacc ac uu ugaagaaua GGU UCC CGUG AUC CGUC Auc ac u a
-cuua u uu guau C CU U A C - u ga u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL849858.1: 3486975-3487039 []
Clustered miRNAs
5 other miRNAs are < 10 kb from sha-mir-18-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-18-1-5p
| Accession | MIMAT0072877 |
| Description | Sarcophilus harrisii sha-miR-18-1-5p mature miRNA |
| Sequence | 31 - UAAGGUGCAUCUAGUGCAGAUAG - 53 |
| Evidence | not_experimental |
Mature sha-miR-18-1-3p
| Accession | MIMAT0072878 |
| Description | Sarcophilus harrisii sha-miR-18-1-3p mature miRNA |
| Sequence | 72 - ACUGCCCUAAGUGCUCCUUCUGGC - 95 |
| Evidence | not_experimental |
References
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