Accession
MI0047234
Description
Sarcophilus harrisii
sha-mir-20c precursor miRNA
Sequence
gugcacuugaaaggacagcuuuuguagcacUAAAGUGCUUAUAGUGCAGGUAGuguuuaguuaucuACUGCAUUAUGAGCACUUGAAGUacugcuagcuguagaacuacaacuucaucg
..............((((((...((((.(((.(((((((((((((((((.(((...........))))))))))))))))))))..))).)))).))))))..................
..............((((((...((((.(((.(((((((((((((((((.(((...........))))))))))))))))))))..))).)))).))))))..................
Structure
----gugcacuugaaagg uuu c -A G uguu
acagcu guag acU AAGUGCUUAUAGUGCAG UAG u
|||||| |||| ||| ||||||||||||||||| ||| a
ugucga cguc UGA UUCACGAGUAUUACGUC Auc g
gcuacuucaacaucaaga --u a AG - uauu
Annotation confidence
Not enough data
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Genome context
GL849858.1: 3486664-3486722 []
Clustered miRNAs
5 other miRNAs are < 10 kb from sha-mir-20c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-20c-5p
| Accession | MIMAT0072873 |
| Description | Sarcophilus harrisii sha-miR-20c-5p mature miRNA |
| Sequence | 31 - UAAAGUGCUUAUAGUGCAGGUAG - 53 |
| Evidence | not_experimental |
Mature sha-miR-20c-3p
| Accession | MIMAT0072874 |
| Description | Sarcophilus harrisii sha-miR-20c-3p mature miRNA |
| Sequence | 67 - ACUGCAUUAUGAGCACUUGAAGU - 89 |
| Evidence | not_experimental |
References
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