miRBase entry: sha-mir-29b-2

Stem-loop sha-mir-29b-2


Accession
MI0047224
Description
Sarcophilus harrisii sha-mir-29b-2 precursor miRNA


Sequence


cccuacuggaccucucucuuacacaggcugACCGAUUUCUCUUGGUGUUCAGAgucuguuuuugucUAGCACCAUUUGAAAUCGGUUAugauguagggggaaaagcagcaguccugga
.((.((((...((.(((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).)))))))))...))...))))...)).

Structure
c  --u    gac  --c         -  ggc           UCU       C   gucu 
 cc   acug   cu   ucucuuaca ca   ugACCGAUUUC   UGGUGUU AGA    g
 ||   ||||   ||   ||||||||| ||   |||||||||||   ||||||| |||    u
 gg   ugac   ga   gggggaugu gu   AUUGGCUAAAG   ACCACGA Ucu    u
a  ucc    gac  aaa         a  ---           UUU       -   guuu 


Annotation confidence Not enough data
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Genome context
GL856780.1: 18895-18952 []
Clustered miRNAs
1 other miRNA is < 10 kb from sha-mir-29b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sha-miR-29b-2-5p

Accession MIMAT0072857
Description Sarcophilus harrisii sha-miR-29b-2-5p mature miRNA
Sequence 31 - ACCGAUUUCUCUUGGUGUUCAGA - 53
Evidence not_experimental

Mature sha-miR-29b-3p

Accession MIMAT0072856
Description Sarcophilus harrisii sha-miR-29b-3p mature miRNA
Sequence 67 - UAGCACCAUUUGAAAUCGGUUA - 88
Evidence not_experimental

References