Accession
MI0047206
Description
Sarcophilus harrisii
sha-mir-182 precursor miRNA
Sequence
ccagacgggcccagccucucuccugcugugUUUGGCAAUGGUAGAACUCACAcuggugagauaacagaauccgGUGGUUCUAGACUUGCCAACUAcggcuugagagggcagacggcggaaccggu
.....((((((..(((.(((((..((((((.(((((((...((((((...((((((..............))))))))))))...))))))).))))))..))))))))....)))....)))..
.....((((((..(((.(((((..((((((.(((((((...((((((...((((((..............))))))))))))...))))))).))))))..))))))))....)))....)))..
Structure
ccaga ---- --ca u cu U UGG UCA ugagau
cgg gcc gcc cucuc gcugug UUGGCAA UAGAAC CAcugg a
||| ||| ||| ||||| |||||| ||||||| |||||| ||||||
gcc cgg cgg gagag cggcAU AACCGUU AUCUUG GUGgcc a
---ug aagg caga - uu C CAG --- uaagac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL861654.1: 977120-977184 []
Clustered miRNAs
2 other miRNAs are < 10 kb from sha-mir-182
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-182-5p
| Accession | MIMAT0072820 |
| Description | Sarcophilus harrisii sha-miR-182-5p mature miRNA |
| Sequence | 31 - UUUGGCAAUGGUAGAACUCACA - 52 |
| Evidence | not_experimental |
Mature sha-miR-182-3p
| Accession | MIMAT0072821 |
| Description | Sarcophilus harrisii sha-miR-182-3p mature miRNA |
| Sequence | 74 - GUGGUUCUAGACUUGCCAACUA - 95 |
| Evidence | not_experimental |
References
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