Stem-loop sha-mir-107-1

Accession

MI0047203

Description

Sarcophilus harrisii sha-mir-107-1 precursor miRNA

Sequence

ucaucuccauccuuucuucuuucugcuuUCGGCUUCUCUACAGUGUUGCCUUGuggcguggaguucaAGCAGCAUUGUACAGGGCUAUCAaagcauagagagcuacagcggaggcgagca
((.(((((........((((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))))).......))))).))...

Structure

---  a     auccuuuc      c      --C    U  C           C   u   g 
   uc ucucc        uucuuu ugcuuU   GGCU CU UACAGUGUUGC UUG ggc u
   || |||||        |||||| ||||||   |||| || ||||||||||| ||| ||| g
   ag ggagg        gagaga acgaaA   UCGG GA AUGUUACGACG Aac uug g
acg  c     -cgacauc      u      CUA    -  C           -   -   a 

Annotation confidence Not enough data

Genome context

GL834454.1: 1480515-1480574 [+]

Mature sha-miR-107-1-5p

• Accession: MIMAT0072815
• Description: Sarcophilus harrisii sha-miR-107-1-5p mature miRNA
• Sequence: 29 - UCGGCUUCUCUACAGUGUUGCCUUG - 53
• Evidence: not_experimental

Mature sha-miR-107-1-3p

• Accession: MIMAT0072814
• Description: Sarcophilus harrisii sha-miR-107-1-3p mature miRNA
• Sequence: 68 - AGCAGCAUUGUACAGGGCUAUCA - 90
• Evidence: not_experimental

References