Accession
MI0047133
Description
Sarcophilus harrisii
sha-mir-13219c precursor miRNA
Sequence
gcaauugucaggacagcccagccuuggcacAUUCUAACUGGGAGCACUUAUUggauauguaagaaccaUAAGUACUCUCUGUUAGGAUGAgccuggcugaggaucgagcuccucuuaaga
.........(((((..(((((((..(((.(((((((((.(((((.((((((.((...........)))))))).))))).))))))))).))).))))).)).....).)))).......
.........(((((..(((((((..(((.(((((((((.(((((.((((((.((...........)))))))).))))).))))))))).))).))))).)).....).)))).......
Structure
gcaauuguc - ---ag - uu a U C U auau
agga c cc cagcc ggc cAUUCUAAC GGGAG ACUUAU gg g
|||| | || ||||| ||| ||||||||| ||||| |||||| || u
uccu g gg gucgg ccg GUAGGAUUG CUCUC UGAAUa cc a
--agaauuc c agcua a -u A U A - aaga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL850554.1: 15527-15586 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from sha-mir-13219c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-13219c-5p
| Accession | MIMAT0072687 |
| Description | Sarcophilus harrisii sha-miR-13219c-5p mature miRNA |
| Sequence | 31 - AUUCUAACUGGGAGCACUUAUU - 52 |
| Evidence | not_experimental |
Mature sha-miR-13219c-3p
| Accession | MIMAT0072686 |
| Description | Sarcophilus harrisii sha-miR-13219c-3p mature miRNA |
| Sequence | 69 - UAAGUACUCUCUGUUAGGAUGA - 90 |
| Evidence | not_experimental |
References
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