Accession
MI0047122
Description
Sarcophilus harrisii
sha-mir-1643 precursor miRNA
Sequence
aagaggugaacggcgaccucaauuuguuccAUCCUUACUAAGGGCACUUUUCagccagcugagggaAAAGUGCUCCUGGUGAGGAAGGaacaguuugagcucauccugccgcgggggg
..........((((((.(((((.(((((((.(((((((((.(((((((((((..((......))))))))))))).))))))))).))))))).))))).)).....)))).......
..........((((((.(((((.(((((((.(((((((((.(((((((((((..((......))))))))))))).))))))))).))))))).))))).)).....)))).......
Structure
aagaggugaa ----- c u A A ag ag
cggc ga cucaa uuguucc UCCUUACUA GGGCACUUUUC cc c
|||| || ||||| ||||||| ||||||||| ||||||||||| ||
gccg cu gaguu gacaaGG AGGAGUGGU CUCGUGAAAag gg u
---ggggggc uccua c u A C -- ag
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL849772.1: 42803-42860 []
Clustered miRNAs
4 other miRNAs are < 10 kb from sha-mir-1643
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-1643-5p
| Accession | MIMAT0072666 |
| Description | Sarcophilus harrisii sha-miR-1643-5p mature miRNA |
| Sequence | 31 - AUCCUUACUAAGGGCACUUUUC - 52 |
| Evidence | not_experimental |
Mature sha-miR-1643-3p
| Accession | MIMAT0072665 |
| Description | Sarcophilus harrisii sha-miR-1643-3p mature miRNA |
| Sequence | 67 - AAAGUGCUCCUGGUGAGGAAGG - 88 |
| Evidence | not_experimental |
References
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