Stem-loop sha-mir-599

Accession

MI0047113

Description

Sarcophilus harrisii sha-mir-599 precursor miRNA

Sequence

cagugaaaaggaugaaguguccagagugugUUUGAUAAGCUGAUAUGGGACAGggauucuuuucacuGUUGUGUCAGUUUAUCAAACCcauaccuggacgccaguuacaguuaaggagu
(..(((....(((...((((((((.(((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))))..)))....)))..)...

Structure

--- ag   aaag   gaa        a    --                 GG     -   u 
   c  uga    gau   guguccag gugu  gUUUGAUAAGCUGAUAU  GACAG gga u
   |  |||    |||   |||||||| ||||  |||||||||||||||||  ||||| ||| c
   g  auu    uug   cgcagguc caua  CAAACUAUUUGACUGUG  UUGuc cuu u
uga ga   gaca   -ac        -    cC                 --     a   u 

Annotation confidence Not enough data

Genome context

GL841372.1: 966959-967017 []

Clustered miRNAs

1 other miRNA is < 10 kb from sha-mir-599

Mature sha-miR-599-5p

• Accession: MIMAT0072647
• Description: Sarcophilus harrisii sha-miR-599-5p mature miRNA
• Sequence: 31 - UUUGAUAAGCUGAUAUGGGACAG - 53
• Evidence: not_experimental

Mature sha-miR-599-3p

• Accession: MIMAT0072648
• Description: Sarcophilus harrisii sha-miR-599-3p mature miRNA
• Sequence: 68 - GUUGUGUCAGUUUAUCAAACC - 88
• Evidence: not_experimental

References