Accession
MI0047107
Description
Sarcophilus harrisii
sha-mir-1541 precursor miRNA
Sequence
guauucucaaccuaugaccuucaaccugugACAUCCCAACUGGGCACACUGUUgugaugauggacagaUGGUGUGCUUGUUUGGAUGUGGcaguuugcaaugggacagacauccagugau
....(((...(((((......(((.((((.((((((.(((.((((((((((((((........))).)))))))))))))).)))))).)))).)))..)))))..)))...........
....(((...(((((......(((.((((.((((((.(((.((((((((((((((........))).)))))))))))))).)))))).)))).)))..)))))..)))...........
Structure
-------guau caa gaccuu c g C U - gau
ucu ccuau caa cugu ACAUCC AAC GGGCACACUGU Ugu g
||| ||||| ||| |||| |||||| ||| ||||||||||| |||
aga gggua guu gacG UGUAGG UUG UUCGUGUGGUa aca a
uagugaccuac -ca ----ac u G U - g ggu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL849772.1: 43949-44008 []
Clustered miRNAs
4 other miRNAs are < 10 kb from sha-mir-1541
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-1541-5p
| Accession | MIMAT0072636 |
| Description | Sarcophilus harrisii sha-miR-1541-5p mature miRNA |
| Sequence | 31 - ACAUCCCAACUGGGCACACUGUU - 53 |
| Evidence | not_experimental |
Mature sha-miR-1541-3p
| Accession | MIMAT0072635 |
| Description | Sarcophilus harrisii sha-miR-1541-3p mature miRNA |
| Sequence | 69 - UGGUGUGCUUGUUUGGAUGUGG - 90 |
| Evidence | not_experimental |
References
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