miRBase entry: sha-mir-13216

Stem-loop sha-mir-13216


Accession
MI0047056
Description
Sarcophilus harrisii sha-mir-13216 precursor miRNA


Sequence


ucuccugugaccaugaccuccaugugucucAGUUGUACGUGGCACUACAUUUUauauaaaaauaaAAGUGGUGUCAUGUACAAUUGUggcccuuggagaagaaccuucuaagcaaga
.................(((((.(.(((.(((((((((((((((((((.((((((......))))))))))))))))))))))))).))).).)))))...................

Structure
--ucuccugugaccaugac     u u   u                   A      au 
                   cucca g guc cAGUUGUACGUGGCACUAC UUUUau  a
                   ||||| | ||| ||||||||||||||||||| ||||||   
                   gaggu c cgg GUUAACAUGUACUGUGGUG AAaaua  a
agaacgaaucuuccaagaa     u c   U                   -      aa 


Annotation confidence Not enough data
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Genome context
GL867599.1: 330790-330846 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from sha-mir-13216
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sha-miR-13216-5p

Accession MIMAT0072541
Description Sarcophilus harrisii sha-miR-13216-5p mature miRNA
Sequence 31 - AGUUGUACGUGGCACUACAUUUU - 53
Evidence not_experimental

Mature sha-miR-13216-3p

Accession MIMAT0072540
Description Sarcophilus harrisii sha-miR-13216-3p mature miRNA
Sequence 66 - AAGUGGUGUCAUGUACAAUUGU - 87
Evidence not_experimental

References