miRBase entry: sha-mir-7398b-2

Stem-loop sha-mir-7398b-2


Accession
MI0046987
Description
Sarcophilus harrisii sha-mir-7398b-2 precursor miRNA


Sequence


cucgggcacuucgcuuuccagaugccuggCAGUGCAGAGGGUGGUGAGCAUGCUguggucucucgagUAUCUCACCUUUCUCUGACUGUCcagcgucuaggacucugcuucgacccagcc
...(((......((..(((((((((.(((((((.(((((((.((((((.(((((..((...))..))))))))))).))))))))))).))))))))).)))....)).....)))....

Structure
-cuc   cacuuc  --uu   -      c   -    G       U      C     gu  u 
    ggg      gc    ucc agaugc ugg CAGU CAGAGGG GGUGAG AUGCU  gg  
    |||      ||    ||| |||||| ||| |||| ||||||| |||||| |||||  || c
    ccc      cg    agg ucugcg acC GUCA GUCUCUU CCACUC UAUga  uc  
ccga   -agcuu  ucuc   a      -   U    -       U      -     gc  u 


Annotation confidence Not enough data
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Genome context
GL867608.1: 2102079-2102138 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from sha-mir-7398b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sha-miR-7398b-5p

Accession MIMAT0072425
Description Sarcophilus harrisii sha-miR-7398b-5p mature miRNA
Sequence 30 - CAGUGCAGAGGGUGGUGAGCAUGCU - 54
Evidence not_experimental

Mature sha-miR-7398b-3p

Accession MIMAT0072424
Description Sarcophilus harrisii sha-miR-7398b-3p mature miRNA
Sequence 68 - UAUCUCACCUUUCUCUGACUGUC - 90
Evidence not_experimental

References