miRBase entry: sha-mir-13194f-2

Stem-loop sha-mir-13194f-2


Accession
MI0046966
Description
Sarcophilus harrisii sha-mir-13194f-2 precursor miRNA


Sequence


acacugcauuuugagcugcugaagucccacUAGGCACUCUGAAGCCACAUGGUUuguauaauuuuuugaaCGAUGUGUCUCAGAGUGUUAUGGgccuuuagcacccacaucaucuucccug
...........((.(.((((((((.((((...((((((((((.(.(((((.(((((..........))))).))))).))))))))))).)))).)))))))).)))..............

Structure
---acacugcauuu  a c        u    cUA          A C     G     uaua 
              ug g ugcugaag ccca   GGCACUCUGA G CACAU GUUug    a
              || | |||||||| ||||   |||||||||| | ||||| |||||     
              ac c acgauuuc gGGU   UUGUGAGACU C GUGUA Caagu    u
gucccuucuacuac  - c        c    --A          - U     G     uuuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL867614.1: 342312-342372 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from sha-mir-13194f-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sha-miR-13194f-2-5p

Accession MIMAT0072387
Description Sarcophilus harrisii sha-miR-13194f-2-5p mature miRNA
Sequence 31 - UAGGCACUCUGAAGCCACAUGGUU - 54
Evidence not_experimental

Mature sha-miR-13194f-2-3p

Accession MIMAT0072388
Description Sarcophilus harrisii sha-miR-13194f-2-3p mature miRNA
Sequence 71 - CGAUGUGUCUCAGAGUGUUAUGG - 93
Evidence not_experimental

References