Stem-loop sha-mir-13194o

Accession

MI0046962

Description

Sarcophilus harrisii sha-mir-13194o precursor miRNA

Sequence

ggcugcauuuugaguugcugaaguaccacuAAACGCUCUGAAGCCUCAUUGUUgguauuauucuuggaaCAAUGUGUCUCAGAGUGUUAUGggccuuuggcacccacaugaucuuccuga
((..(.(((.((...((((((((..(((...((((((((((.((..(((((((..............))))))).)).)))))))))).)))..))))))))....)).))))..))...

Structure

---  cu c   u  -agu        ua   cuA          A  CU       gguauu 
   gg  g auu ug    ugcugaag  cca   AACGCUCUGA GC  CAUUGUU      a
   ||  | ||| ||    ||||||||  |||   |||||||||| ||  |||||||       
   cc  c uag ac    acgguuuc  gGU   UUGUGAGACU UG  GUAACaa      u
agu  uu -   u  accc        cg   --A          C  -U       gguucu 

Annotation confidence Not enough data

Genome context

GL867758.1: 569-628 []

Clustered miRNAs

3 other miRNAs are < 10 kb from sha-mir-13194o

Mature sha-miR-13194o-5p

• Accession: MIMAT0072379
• Description: Sarcophilus harrisii sha-miR-13194o-5p mature miRNA
• Sequence: 31 - AAACGCUCUGAAGCCUCAUUGUU - 53
• Evidence: not_experimental

Mature sha-miR-13194o-3p

• Accession: MIMAT0072380
• Description: Sarcophilus harrisii sha-miR-13194o-3p mature miRNA
• Sequence: 70 - CAAUGUGUCUCAGAGUGUUAUG - 91
• Evidence: not_experimental

References