miRBase entry: sha-mir-13201

Stem-loop sha-mir-13201


Accession
MI0046952
Description
Sarcophilus harrisii sha-mir-13201 precursor miRNA


Sequence


ugaaaugguuuugagcugcuggggccccccAUCUGGUCUGAAGACACAUUGUUucuaugacucuuucaaCAAUGUGUCUCAGAUCAGUUGCgggucuuuagaacgcauaucaucaucuuca
(((((((((..((.((..((((((.(((.((.(((((((((.(((((((((((..............)))))))))))))))))))).)).))).))))))...)).))..))))).))))

Structure
    -     uu  a  -ug      c   c  U         A           ucuaug 
ugaa auggu  ug gc   cugggg ccc cA CUGGUCUGA GACACAUUGUU      a
|||| |||||  || ||   |||||| ||| || ||||||||| |||||||||||       
acuu uacua  au cg   gauuuc ggg GU GACUAGACU CUGUGUAACaa      c
    c     cu  a  caa      u   C  U         -           cuuucu 


Annotation confidence Not enough data
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Genome context
GL867762.1: 6910-6970 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from sha-mir-13201
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sha-miR-13201-5p

Accession MIMAT0072363
Description Sarcophilus harrisii sha-miR-13201-5p mature miRNA
Sequence 31 - AUCUGGUCUGAAGACACAUUGUU - 53
Evidence not_experimental

Mature sha-miR-13201-3p

Accession MIMAT0072364
Description Sarcophilus harrisii sha-miR-13201-3p mature miRNA
Sequence 70 - CAAUGUGUCUCAGAUCAGUUGC - 91
Evidence not_experimental

References