miRBase entry: sha-mir-13194-1-2

Stem-loop sha-mir-13194-1-2


Accession
MI0046947
Description
Sarcophilus harrisii sha-mir-13194-1-2 precursor miRNA


Sequence


gggugaauuuuugagcugcugaaguaccacUAGCCUUUCUGAAAUCACAUUGUuuguaugacucguugaacAAUGUGUCUCAGAUUGGUGUGGaccuuuaguacccacaacaucaucaucu
.(((((..((.((.(.((((((((..((((..(((..(((((...(((((((((((.(((...))))))))))))))..)))))..)))))))..)))))))).))).))..)))))....

Structure
---g     au  u  a c        ua    UA   UU     AAU           u   a 
    gguga  uu ug g ugcugaag  ccac  GCC  UCUGA   CACAUUGUuug aug  
    |||||  || || | ||||||||  ||||  |||  |||||   ||||||||||| ||| c
    cuacu  aa ac c augauuuc  GGUG  UGG  AGACU   GUGUAAcaagu ugc  
ucua     ac  c  - c        ca    --   UU     -CU           -   u 


Annotation confidence Not enough data
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Genome context
GL867809.1: 15354-15414 []
Clustered miRNAs
4 other miRNAs are < 10 kb from sha-mir-13194-1-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sha-miR-13194-1-2-5p

Accession MIMAT0072355
Description Sarcophilus harrisii sha-miR-13194-1-2-5p mature miRNA
Sequence 31 - UAGCCUUUCUGAAAUCACAUUGU - 53
Evidence not_experimental

Mature sha-miR-13194-1-2-3p

Accession MIMAT0072356
Description Sarcophilus harrisii sha-miR-13194-1-2-3p mature miRNA
Sequence 72 - AAUGUGUCUCAGAUUGGUGUGG - 93
Evidence not_experimental

References