miRBase entry: sha-mir-13194-2-2

Stem-loop sha-mir-13194-2-2


Accession
MI0046944
Description
Sarcophilus harrisii sha-mir-13194-2-2 precursor miRNA


Sequence


aggugaauuuuugagcugcugaaguaccacUAGCCUUUCUGAAAUCACAUUGUuuguaugacucgcugaacAAUGUGUCUCAGAUUGGUGUGGaccuuuaguacucacaacaucaucaucu
.(((((..((.((((.((((((((..((((..(((..(((((...((((((((((((.......)).))))))))))..)))))..)))))))..)))))))))))).))..)))))....

Structure
---a     au  u    c        ua    UA   UU     AAU          -  au 
    gguga  uu ugag ugcugaag  ccac  GCC  UCUGA   CACAUUGUuu gu  g
    |||||  || |||| ||||||||  ||||  |||  |||||   |||||||||| ||  a
    cuacu  aa acuc augauuuc  GGUG  UGG  AGACU   GUGUAAcaag cg  c
ucua     ac  c    -        ca    --   UU     -CU          u  cu 


Annotation confidence Not enough data
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Genome context
GL867809.1: 21090-21150 []
Clustered miRNAs
4 other miRNAs are < 10 kb from sha-mir-13194-2-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sha-miR-13194-2-2-5p

Accession MIMAT0072349
Description Sarcophilus harrisii sha-miR-13194-2-2-5p mature miRNA
Sequence 31 - UAGCCUUUCUGAAAUCACAUUGU - 53
Evidence not_experimental

Mature sha-miR-13194-2-2-3p

Accession MIMAT0072350
Description Sarcophilus harrisii sha-miR-13194-2-2-3p mature miRNA
Sequence 72 - AAUGUGUCUCAGAUUGGUGUGG - 93
Evidence not_experimental

References