Accession
MI0046924
Description
Sarcophilus harrisii
sha-mir-13188a precursor miRNA
Sequence
aaacagucccucuuuuccugacugccuacuUGAGGUUUGAGCUCGUGGCUACUcauuucucuuggUAGCCAGCAGCCAAACCUUUAGuaguaagucagaauggcaacaaagaggaca
.....((((.(((((((((((((..(((((.((((((((.(((..(((((((.((.......)))))))))..))))))))))).)))))..))))))...))....))))))))).
.....((((.(((((((((((((..(((((.((((((((.(((..(((((((.((.......)))))))))..))))))))))).)))))..))))))...))....))))))))).
Structure
aaaca c ---- --- gc U A CG U uu
gucc ucuuu uc cugacu cuacu GAGGUUUG GCU UGGCUAC ca u
|||| ||||| || |||||| ||||| |||||||| ||| ||||||| || c
cagg agaaa gg gacuga gauGA UUCCAAAC CGA ACCGAUg gu u
----a - caac uaa au U - CG - uc
Annotation confidence
Not enough data
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Genome context
GL867904.1: 83832-83888 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from sha-mir-13188a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-13188a-5p
| Accession | MIMAT0072316 |
| Description | Sarcophilus harrisii sha-miR-13188a-5p mature miRNA |
| Sequence | 31 - UGAGGUUUGAGCUCGUGGCUACU - 53 |
| Evidence | not_experimental |
Mature sha-miR-13188a-3p
| Accession | MIMAT0072317 |
| Description | Sarcophilus harrisii sha-miR-13188a-3p mature miRNA |
| Sequence | 66 - UAGCCAGCAGCCAAACCUUUAG - 87 |
| Evidence | not_experimental |
References
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