Accession
MI0046922
Description
Sarcophilus harrisii
sha-mir-13188c precursor miRNA
Sequence
gaacagucccucuuuuccugacugccuacuUGAGGUUUGAGCUACUGGCUACCcauuucgcuuggUAUCCAGCAGCCAAACCUCAGUagugagucggaauggcaacaaagaggaca
.....((((.((((((((.((((..(((((.((((((((.(((.((((.((((..........)))).)))).))))))))))))))))..)))))))........))))))))).
.....((((.((((((((.((((..(((((.((((((((.(((.((((.((((..........)))).)))).))))))))))))))))..)))))))........))))))))).
Structure
gaaca c -------- u gc U A A C cauu
gucc ucuuu ucc gacu cuacu GAGGUUUG GCU CUGG UACC u
|||| ||||| ||| |||| ||||| |||||||| ||| |||| ||||
cagg agaaa agg cuga gaUGA CUCCAAAC CGA GACC AUgg c
----a - caacggua - gu - - C U uucg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL867904.1: 85513-85568 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from sha-mir-13188c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-13188c-5p
| Accession | MIMAT0072312 |
| Description | Sarcophilus harrisii sha-miR-13188c-5p mature miRNA |
| Sequence | 31 - UGAGGUUUGAGCUACUGGCUACC - 53 |
| Evidence | not_experimental |
Mature sha-miR-13188c-3p
| Accession | MIMAT0072313 |
| Description | Sarcophilus harrisii sha-miR-13188c-3p mature miRNA |
| Sequence | 66 - UAUCCAGCAGCCAAACCUCAGU - 87 |
| Evidence | not_experimental |
References
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