miRBase entry: tgu-mir-1a-3

Stem-loop tgu-mir-1a-3


Accession
MI0046897
Description
Taeniopygia guttata tgu-mir-1a-3 precursor miRNA


Sequence


ccgcggcacccgccucucccucccaacccuACAUACUUCUUCAUAUGCCCAUAuggagccggccggugcuaUGGAAUGUUAAGAAGUAUGUAUuuuugggcugggacccccacgccaagagcc
..((((...))))...((((.(((((...((((((((((((.((((..(((((.(..(((....))).)))))).)))).))))))))))))...)))))..)))).................

Structure
-ccgcggcacccgccuc    -u     ccc            C    GC     u ga   g 
                 uccc  cccaa   uACAUACUUCUU AUAU  CCAUA g  gcc g
                 ||||  |||||   |||||||||||| ||||  ||||| |  |||  
                 aggg  ggguu   AUGUAUGAAGAA UGUA  GGUau c  ugg c
ccgagaaccgcaccccc    uc     uuU            U    -A     - -g   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
23: 1378978-1379040 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tgu-mir-1a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tgu-miR-1a-3-5p

Accession MIMAT0072264
Description Taeniopygia guttata tgu-miR-1a-3-5p mature miRNA
Sequence 31 - ACAUACUUCUUCAUAUGCCCAUA - 53
Evidence not_experimental

Mature tgu-miR-1a-3-3p

Accession MIMAT0072263
Description Taeniopygia guttata tgu-miR-1a-3-3p mature miRNA
Sequence 72 - UGGAAUGUUAAGAAGUAUGUAU - 93
Evidence not_experimental

References