miRBase entry: tgu-mir-143

Stem-loop tgu-mir-143


Accession
MI0046876
Description
Taeniopygia guttata tgu-mir-143 precursor miRNA


Sequence


agcaggacacguccgugucucccagcccgaGGUGCAGUGCUGCAUCUCUGGucaauugggagucUGAGAUGAAGCACUGUAGCUCgggaagggaggaacugcccaccccgggcac
.((((((....))).)))(((((..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..)))))....(((((.....))))).

Structure
--agcaggacacguccgugu     ag      G         G      U  -  aa 
                    cuccc  cccgaG UGCAGUGCU CAUCUC GG uc  u
                    |||||  |||||| ||||||||| |||||| || ||   
                    gaggg  gggCUC AUGUCACGA GUAGAG cu ag  u
cacgggccccacccgucaag     aa      G         A      U  g  gg 


Annotation confidence Not enough data
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Genome context
13: 16705964-16706018 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tgu-mir-143
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tgu-miR-143-5p

Accession MIMAT0072224
Description Taeniopygia guttata tgu-miR-143-5p mature miRNA
Sequence 31 - GGUGCAGUGCUGCAUCUCUGG - 51
Evidence not_experimental

Mature tgu-miR-143-3p

Accession MIMAT0072223
Description Taeniopygia guttata tgu-miR-143-3p mature miRNA
Sequence 65 - UGAGAUGAAGCACUGUAGCUC - 85
Evidence not_experimental

References