miRBase entry: mdo-mir-1544j

Stem-loop mdo-mir-1544j


Accession
MI0046832
Description
Monodelphis domestica mdo-mir-1544j precursor miRNA


Sequence


gagacagagcuaccacuuagcaccugacccUGUGUCCUAGGAUAGAUAAGUGAucccuuuguaauccCCUUUUCCAUCCUUGGCAUUGGuuccacugcuaccuucaccacuauugccuu
(((.(((((........(((((...((.((.(((((..(((((.((.(((.(((.........)))..))).)).))))).))))).)).))...))))).........)).))).)))

Structure
   a   -  -cuaccacu     ccu  c  U     CU     A  U   -U   ccc 
gag cag ag         uagca   ga cc GUGUC  AGGAU GA AAG  GAu   u
||| ||| ||         |||||   || || |||||  ||||| || |||  |||   u
uuc guu uc         aucgu   cu GG UACGG  UCCUA CU UUC  cua   u
   c   a  accacuucc     cac  u  U     -U     C  U   Cc   aug 


Annotation confidence Not enough data
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Genome context
ref|NC_077235.2|: 13804756-13804874 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from mdo-mir-1544j
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-1544j-5p

Accession MIMAT0072141
Description Monodelphis domestica mdo-miR-1544j-5p mature miRNA
Sequence 31 - UGUGUCCUAGGAUAGAUAAGUGA - 53
Evidence not_experimental

Mature mdo-miR-1544j-3p

Accession MIMAT0072142
Description Monodelphis domestica mdo-miR-1544j-3p mature miRNA
Sequence 68 - CCUUUUCCAUCCUUGGCAUUGG - 89
Evidence not_experimental

References