miRBase entry: cja-mir-212

Stem-loop cja-mir-212


Accession
MI0046514
Description
Callithrix jacchus cja-mir-212 precursor miRNA


Sequence


cggggcaccccgcccggacagcgcgccggcACCUUGGCUCUAGACUGCUUACUgcccgggccgcccucagUAACAGUCUCCAGUCACGGCCAccgacgccuggccccgccccaggacugcgg
..((((.....))))((.(((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).)))))).))((((.........))))

Structure
--cggggcaccccgccc  a   c   c   -cA  U     CU      C      ccc   c 
                 gg cag gcg cgg   CC UGGCU  AGACUG UUACUg   ggg  
                 || ||| ||| |||   || |||||  |||||| ||||||   ||| c
                 cc guc cgc gcc   GG ACUGA  UCUGAC AAUgac   ccc  
ggcgucaggaccccgcc  g   -   a   ACC  C     CC      -      --u   g 


Annotation confidence Not enough data
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Genome context
ref|NC_071446.1|: 62273472-62273593 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-212
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-212-5p

Accession MIMAT0071550
Description Callithrix jacchus cja-miR-212-5p mature miRNA
Sequence 31 - ACCUUGGCUCUAGACUGCUUACU - 53
Evidence not_experimental

Mature cja-miR-212-3p

Accession MIMAT0071549
Description Callithrix jacchus cja-miR-212-3p mature miRNA
Sequence 71 - UAACAGUCUCCAGUCACGGCCA - 92
Evidence not_experimental

References