miRBase entry: cja-mir-136

Stem-loop cja-mir-136


Accession
MI0046511
Description
Callithrix jacchus cja-mir-136 precursor miRNA


Sequence


ccucgguggugcuggaugagcccucggaggACUCCAUUUGUUUUGAUGAUGGauucuuaugcuccAUCAUCGUCUCAAAUGAGUCUucagaggguucuaucauuucgucggaugac
..(((((((.....(((((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).)))))))).)))...))))))).....

Structure
---cc       ugcug   -        g        C     UUU          uuc 
     ucggugg     gau gagcccuc gaggACUC AUUUG   UGAUGAUGGa   u
     |||||||     ||| |||||||| |||||||| |||||   ||||||||||   u
     ggcugcu     cua cuugggag cuUCUGAG UAAAC   GCUACUAccu   a
cagua       --uua   u        a        -     UCU          cgu 


Annotation confidence Not enough data
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Genome context
ref|NC_071451.1|: 131692150-131692265 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from cja-mir-136
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-136-5p

Accession MIMAT0071543
Description Callithrix jacchus cja-miR-136-5p mature miRNA
Sequence 31 - ACUCCAUUUGUUUUGAUGAUGG - 52
Evidence not_experimental

Mature cja-miR-136-3p

Accession MIMAT0071544
Description Callithrix jacchus cja-miR-136-3p mature miRNA
Sequence 66 - AUCAUCGUCUCAAAUGAGUCU - 86
Evidence not_experimental

References