Accession
MI0046497
Description
Callithrix jacchus
cja-mir-199a-1 precursor miRNA
Sequence
aggaagcuucuggagauccugcuccgucgcCCCAGUGUUCAGACUACCUGUUCaggacaaugccguuguACAGUAGUCUGCACAUUGGUUAgacugggcaagggagagcaacgccaugaac
.((..(((.((.....((((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).)))))))))....))......
.((..(((.((.....((((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).)))))))))....))......
Structure
-----a --aa u ggaga - c gcC U C U -- ac
gg gcu cu uccu gcuc guc CCAGUGU CAGACUAC UGU Ca gg a
|| ||| || |||| |||| ||| ||||||| |||||||| ||| || ||
cc cga ga ggga cggg cag GGUUACA GUCUGAUG ACA gu cc a
caagua gcaa - ----- a u AUU C - u ug gu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NC_071459.1|: 24123329-24123449 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cja-mir-199a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cja-miR-199a-1-5p
| Accession | MIMAT0071515 |
| Description | Callithrix jacchus cja-miR-199a-1-5p mature miRNA |
| Sequence | 31 - CCCAGUGUUCAGACUACCUGUUC - 53 |
| Evidence | not_experimental |
Mature cja-miR-199a-1-3p
| Accession | MIMAT0071516 |
| Description | Callithrix jacchus cja-miR-199a-1-3p mature miRNA |
| Sequence | 70 - ACAGUAGUCUGCACAUUGGUUA - 91 |
| Evidence | not_experimental |
References
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