Stem-loop cja-mir-221

Accession

MI0046493

Description

Callithrix jacchus cja-mir-221 precursor miRNA

Sequence

gcgagcugagcauccagguuuggggcaugaACCUGGCAUACAAUGUAGAUUUCUGUguucauuaggcaacAGCUACAUUGUCUGCUGGGUUUCaggcuaccuggaaacauguucuccguuggc
((.(((.((((((((((((....(((.(((((((((((.(((((((((....(((((((.....))).))))))))))))).))))))).)))).))))))))))....)))))...))).))

Structure

  g   --u     ----       uugg   a    -       U         AUUU    -   c 
gc agc   gagca    uccaggu    ggc ugaA CCUGGCA ACAAUGUAG    CUGU guu a
|| |||   |||||    |||||||    ||| |||| ||||||| |||||||||    |||| ||| u
cg uug   cuugu    aggucca    ucg aCUU GGGUCGU UGUUACAUC    GAca cgg u
  g   ccu     acaa       ----   g    U       C         ----    a   a 

Annotation confidence Not enough data

Genome context

ref|NC_071464.1|: 45129937-45130059 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-221

Mature cja-miR-221-5p

• Accession: MIMAT0071508
• Description: Callithrix jacchus cja-miR-221-5p mature miRNA
• Sequence: 31 - ACCUGGCAUACAAUGUAGAUUUCUGU - 56
• Evidence: not_experimental

Mature cja-miR-221-3p

• Accession: MIMAT0071507
• Description: Callithrix jacchus cja-miR-221-3p mature miRNA
• Sequence: 71 - AGCUACAUUGUCUGCUGGGUUUC - 93
• Evidence: not_experimental

References