miRBase entry: cja-mir-502c

Stem-loop cja-mir-502c


Accession
MI0046490
Description
Callithrix jacchus cja-mir-502c precursor miRNA


Sequence


ccugagccuucugcuuugcucuuucucuccAAUCCUUUGUCCCUGGGUAAGAGUGcuuucugaaugcCAUGCACCCAGGGAAGGAUUCGgcaagggggagugucaucuucccauaggac
(((((((..........))))...((..((((((((...(((((((((..(.(.((.........))).)..))))))))))))))).))..))((((((......))))))..)))..

Structure
--   gagccuucugcuuugcucuuu  cu  -      UUG         AA A U  uuu 
  ccu                     cu  cc AAUCCU   UCCCUGGGU  G G Gc   c
  |||                     ||  || ||||||   |||||||||  | | ||   u
  gga                     ga  gG UUAGGA   AGGGACCCA  U C cg   g
ca   -uacccuucuacugugagggg  ac  C      ---         CG A -  uaa 


Annotation confidence Not enough data
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Genome context
ref|NC_071464.1|: 48751259-48751377 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cja-mir-502c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-502c-5p

Accession MIMAT0071502
Description Callithrix jacchus cja-miR-502c-5p mature miRNA
Sequence 31 - AAUCCUUUGUCCCUGGGUAAGAGUG - 55
Evidence not_experimental

Mature cja-miR-502c-3p

Accession MIMAT0071501
Description Callithrix jacchus cja-miR-502c-3p mature miRNA
Sequence 68 - CAUGCACCCAGGGAAGGAUUCG - 89
Evidence not_experimental

References