miRBase entry: cja-mir-512

Stem-loop cja-mir-512


Accession
MI0046485
Description
Callithrix jacchus cja-mir-512 precursor miRNA


Sequence


augcagggagagggcuucucagucuguggcACUCAGCCCUGAGGGCACUUUCugguguaagaaacgaAAGUGCCGUCAAGGCUGAGAGCcaaugacugaggcaagcaccguggugggug
((.((....(.(((((((((((((..((((.(((((((.(((.(((((((((..((.......))))))))))).))).))))))).))))..))))))))..))).)).)..)).)).

Structure
-  g  ggga a  -   --        ug    A       C   G         ug  gu 
 au ca    g gg gcu  ucucaguc  uggc CUCAGCC UGA GGCACUUUC  gu  a
 || ||    | || |||  ||||||||  |||| ||||||| ||| |||||||||  ||  a
 ug gu    u cc cga  ggagucag  acCG GAGUCGG ACU CCGUGAAag  ca  g
g  g  --gg g  a   ac        ua    A       A   G         --  aa 


Annotation confidence Not enough data
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Genome context
ref|NC_071463.1|: 45463631-45463749 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cja-mir-512
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-512-5p

Accession MIMAT0071494
Description Callithrix jacchus cja-miR-512-5p mature miRNA
Sequence 31 - ACUCAGCCCUGAGGGCACUUUC - 52
Evidence not_experimental

Mature cja-miR-512-3p

Accession MIMAT0071493
Description Callithrix jacchus cja-miR-512-3p mature miRNA
Sequence 68 - AAGUGCCGUCAAGGCUGAGAGC - 89
Evidence not_experimental

References