Accession
MI0046484
Description
Callithrix jacchus
cja-mir-520 precursor miRNA
Sequence
ugcuggagcaagacuaucucaugcugugacCCUCAAGAUGGAAGCAAUUUCUguugucugaaaggaaggAAAGUGCUUUCUUUUUGAGAGUuacuguuugggaaaagcaaccuugaugcug
(((....)))......(((((.((.(((((.(((((((.(((((((.(((((....(((...)))..))))).))))))).))))))).))))).)).)))))..((((.......)))).
(((....)))......(((((.((.(((((.(((((((.(((((((.(((((....(((...)))..))))).))))))).))))))).))))).)).)))))..((((.......)))).
Structure
--ugcuggagcaagacua u u C U A guug g
ucuca gc gugac CUCAAGA GGAAGCA UUUCU ucu
||||| || ||||| ||||||| ||||||| ||||| ||| a
agggu ug cauUG GAGUUUU CUUUCGU AAAgg gga
gucguaguuccaacgaaa u u A U G --aa a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NC_071463.1|: 45466668-45466788 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cja-mir-520
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cja-miR-520-5p
| Accession | MIMAT0071492 |
| Description | Callithrix jacchus cja-miR-520-5p mature miRNA |
| Sequence | 31 - CCUCAAGAUGGAAGCAAUUUCU - 52 |
| Evidence | not_experimental |
Mature cja-miR-520-3p
| Accession | MIMAT0071491 |
| Description | Callithrix jacchus cja-miR-520-3p mature miRNA |
| Sequence | 70 - AAAGUGCUUUCUUUUUGAGAGU - 91 |
| Evidence | not_experimental |
References
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