miRBase entry: cja-mir-433

Stem-loop cja-mir-433


Accession
MI0046482
Description
Callithrix jacchus cja-mir-433 precursor miRNA


Sequence


gaagaagaagacccaguggccggggagaagUACGGUGAGCCUGUCAUUAUUCagagaggcuagauccucuguguugagaaggAUCAUGAUGGGCUCCUCGGUGUucuccagguagcggcaccacaccaugaagg
............((.((.(((..((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).))).))))................

Structure
----gaagaagaagac  a  g   gg      gUA   U           U   --------  g     cu 
                cc gu gcc  ggagaa   CGG GAGCCUGUCAU AUU        Ca agagg  a
                || || |||  ||||||   ||| ||||||||||| |||        || |||||   
                gg cg ugg  ccucuU   GCU CUCGGGUAGUA UAg        gu ucucc  g
ggaaguaccacaccac  -  a   -a      GUG   C           C   gaagaguu  g     ua 


Annotation confidence Not enough data
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Genome context
ref|NC_071451.1|: 131689328-131689461 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from cja-mir-433
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-433-5p

Accession MIMAT0071488
Description Callithrix jacchus cja-miR-433-5p mature miRNA
Sequence 31 - UACGGUGAGCCUGUCAUUAUUC - 52
Evidence not_experimental

Mature cja-miR-433-3p

Accession MIMAT0071487
Description Callithrix jacchus cja-miR-433-3p mature miRNA
Sequence 83 - AUCAUGAUGGGCUCCUCGGUGU - 104
Evidence not_experimental

References