Stem-loop cja-mir-550

Accession

MI0046470

Description

Callithrix jacchus cja-mir-550 precursor miRNA

Sequence

cugguacuuugaugcuuugcuggcugcugcAGUGCCUGAGGGAGUAAGAGCCCUguuguaagauagUGUCUUAUUCCCUCUGGCAUAUCuccagcaaguaccuugcucuccuccaauuu
.(((......((.((..((((.((((..(..(((((.((((((((((((.(.(((((....))))).))))))))))))).)))))..)..)))).))))....))))....)))....

Structure

---c   uacuuu  u  --uu    g    cu cA     U            G C     g 
    ugg      ga gc    ugcu gcug  g  GUGCC GAGGGAGUAAGA C CUguu u
    |||      || ||    |||| ||||  |  ||||| |||||||||||| | |||||  
    acc      cu cg    auga cgac  C  UACGG CUCCCUUAUUCU G gauag a
uuua   --uccu  -  uucc    a    cu UA     U            - U     a 

Annotation confidence Not enough data

Genome context

ref|NC_071449.1|: 25232823-25232941 [-]

Mature cja-miR-550-5p

• Accession: MIMAT0071464
• Description: Callithrix jacchus cja-miR-550-5p mature miRNA
• Sequence: 31 - AGUGCCUGAGGGAGUAAGAGCCCU - 54
• Evidence: not_experimental

Mature cja-miR-550-3p

• Accession: MIMAT0071463
• Description: Callithrix jacchus cja-miR-550-3p mature miRNA
• Sequence: 67 - UGUCUUAUUCCCUCUGGCAUAUC - 89
• Evidence: not_experimental

References