miRBase entry: cja-mir-548

Stem-loop cja-mir-548


Accession
MI0046465
Description
Callithrix jacchus cja-mir-548 precursor miRNA


Sequence


uggaaucauauuagauugaugcaaaaguaaUCACGGUUUGUGCCAAAUGGCGAuuugaauugaaUUCAUUUGGCACAAAUCACGAUUacuuuugcaucaaccuaauauaguauaugu
.......(((((((.(((((((((((((((((..((((((((((((((((((((....))))...))))))))))))))))..))))))))))))))))).))))))).........

Structure
--uggaauc       a                 AC                ---    u 
         auauuag uugaugcaaaaguaaUC  GGUUUGUGCCAAAUGG   CGAu u
         ||||||| |||||||||||||||||  ||||||||||||||||   ||||  
         uauaauc aacuacguuuucaUUAG  CUAAACACGGUUUACU   guua g
uguauauga       c                 CA                Uaa    a 


Annotation confidence Not enough data
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Genome context
ref|NC_071443.1|: 169635640-169635756 [+]

Database links

Mature cja-miR-548-5p

Accession MIMAT0071454
Description Callithrix jacchus cja-miR-548-5p mature miRNA
Sequence 31 - UCACGGUUUGUGCCAAAUGGCGA - 53
Evidence not_experimental

Mature cja-miR-548-3p

Accession MIMAT0071453
Description Callithrix jacchus cja-miR-548-3p mature miRNA
Sequence 65 - UUCAUUUGGCACAAAUCACGAUU - 87
Evidence not_experimental

References