miRBase entry: cja-mir-1180

Stem-loop cja-mir-1180


Accession
MI0046452
Description
Callithrix jacchus cja-mir-1180 precursor miRNA


Sequence


agucccggcggggcuaagcccgcggcugccGGACCCACCCGGCCGGGAAUAgugcuccugguugUUUCCGGCUCGUGUGGGUGUGUuggcggcggggccugacacccccggccucu
.......(((((......))))).((((((((((((((.(((((((((((((..(....).))))))))))).)).))))))...))))))))((((((.(......).)))))).

Structure
agucccggcggggcuaagcccgcg        ---      C  -           ug u 
                        gcugccGG   ACCCAC CG GCCGGGAAUAg  c c
                        ||||||||   |||||| || |||||||||||  |  
                        cggcgguU   UGGGUG GC CGGCCUUUguu  g c
-ucuccggcccccacaguccgggg        GUG      U  U           -g u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NC_071446.1|: 79252682-79252797 [-]

Database links

Mature cja-miR-1180-5p

Accession MIMAT0071428
Description Callithrix jacchus cja-miR-1180-5p mature miRNA
Sequence 31 - GGACCCACCCGGCCGGGAAUA - 51
Evidence not_experimental

Mature cja-miR-1180-3p

Accession MIMAT0071427
Description Callithrix jacchus cja-miR-1180-3p mature miRNA
Sequence 65 - UUUCCGGCUCGUGUGGGUGUGU - 86
Evidence not_experimental

References