Stem-loop cja-mir-3187

Accession

MI0046438

Description

Callithrix jacchus cja-mir-3187 precursor miRNA

Sequence

cgcggggucguccagcgagggcgcgcuggcCCUGGGCAGCGUGUGGCUGAAGGucaccauguucuccUUGGCCAUGGGGCUGCGCGGCGCcagcagguccacguccacgcuggcgcgcuu
...((.(.((.((((((.(((((.((((((.(((.(((((.(((((((.((((............)))))))))))..))))).))).)))))).......))))).))))))))).)).

Structure

cgc  g u  u      a     ------c      C   G     -G       G    ucacc 
   gg g cg ccagcg gggcg       gcuggc CUG GCAGC  UGUGGCU AAGG     a
   || | || |||||| |||||       |||||| ||| |||||  ||||||| ||||      
   uc c gc ggucgc ccugc       cgacCG GGC CGUCG  GUACCGG UUcc     u
--u  g -  -      a     accugga      C   G     GG       -    ucuug 

Annotation confidence Not enough data

Genome context

ref|NC_071463.1|: 498233-498352 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-3187

Mature cja-miR-3187-5p

• Accession: MIMAT0071400
• Description: Callithrix jacchus cja-miR-3187-5p mature miRNA
• Sequence: 31 - CCUGGGCAGCGUGUGGCUGAAGG - 53
• Evidence: not_experimental

Mature cja-miR-3187-3p

• Accession: MIMAT0071399
• Description: Callithrix jacchus cja-miR-3187-3p mature miRNA
• Sequence: 68 - UUGGCCAUGGGGCUGCGCGGCGC - 90
• Evidence: not_experimental

References