miRBase entry: csc-mir-317-1

Stem-loop csc-mir-317-1


Accession
MI0043404
Description
Centruroides sculpturatus csc-mir-317-1 precursor miRNA


Sequence


guugucuaucggcaguuccugagaaggggcUGAGUACCACUCUGAGUUCACAuguuagucuguugUGAACACAGCUGGUGGUAUCUCAGUuaccucccagacuacuucgacugucugauc
.......((((((((((.(((.(.((((((((((((((((((((.(((((((...........))))))).)))..))))))).))))))).))).))))........))))).))))).

Structure
guugucu     -     -------c   a a   -       -       --   A       uguu 
       aucgg caguu        cug g agg ggcUGAG UACCACU  CUG GUUCACA    a
       ||||| |||||        ||| | ||| ||||||| |||||||  ||| |||||||    g
       uaguc gucag        gac c ucc uUGACUC AUGGUGG  GAC CAAGUgu    u
------c     u     cuucauca   - c   a       U       UC   A       uguc 


Annotation confidence Not enough data
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Genome context
NW_019384537.1: 174576-174635 []
Clustered miRNAs
1 other miRNA is < 10 kb from csc-mir-317-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature csc-miR-317-5p

Accession MIMAT0065893
Description Centruroides sculpturatus csc-miR-317-5p mature miRNA
Sequence 31 - UGAGUACCACUCUGAGUUCACA - 52
Evidence not_experimental

Mature csc-miR-317-3p

Accession MIMAT0065894
Description Centruroides sculpturatus csc-miR-317-3p mature miRNA
Sequence 66 - UGAACACAGCUGGUGGUAUCUCAGU - 90
Evidence not_experimental

References