Stem-loop smc-mir-12459

Accession

MI0041068

Description

Symbiodinium microadriaticum smc-mir-12459 precursor miRNA

Sequence

UACCGUCCCUGAGAGUUCAAUGagucucugggagacacuccggcgaagcgucucccagagacucaUCGAACUUUCAGGAAUAGUAUC
(((.((.(((((((((((.(((((((((((((((((.((.......)).))))))))))))))))).))))))))))).)).)))..

Structure

--   C  C           A                 a  cc 
  UAC GU CCUGAGAGUUC AUGagucucugggagac cu  g
  ||| || ||||||||||| ||||||||||||||||| ||  g
  AUG UA GGACUUUCAAG Uacucagagacccucug ga  c
CU   A  A           C                 c  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature smc-miR-12459-5p

• Accession: MIMAT0050483
• Description: Symbiodinium microadriaticum smc-miR-12459-5p mature miRNA
• Sequence: 1 - UACCGUCCCUGAGAGUUCAAUG - 22
• Evidence: experimental ; Illumina [1]

Mature smc-miR-12459-3p

• Accession: MIMAT0050484
• Description: Symbiodinium microadriaticum smc-miR-12459-3p mature miRNA
• Sequence: 66 - UCGAACUUUCAGGAAUAGUAUC - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119094
   Integrating microRNA and mRNA expression profiling in Symbiodinium microadriaticum, a dinoflagellate symbiont of reef-building corals
   "Baumgarten S, Bayer T, Aranda M, Liew YJ, Carr A, Micklem G, Voolstra CR"
   "BMC Genomics (2013) 14:704