Stem-loop smc-mir-12455-2

Accession

MI0041066

Description

Symbiodinium microadriaticum smc-mir-12455-2 precursor miRNA

Sequence

CUGUGACCGUCCCAUCCUUGCGgaucagcucccgucgucugucgucagagugcgggaguccaaccgCAAGGAUGGGAUGGUCAGAGAA
((.((((((((((((((((((((....((((((((..((((....))))..))))))))....)))))))))))))))))))).))..

Structure

--  G                    auca        cg    u 
  CU UGACCGUCCCAUCCUUGCGg    gcucccgu  ucug c
  || ||||||||||||||||||||    ||||||||  ||||  
  GA ACUGGUAGGGUAGGAACgcc    ugagggcg  agac g
AA  G                    aacc        ug    u 

Annotation confidence Not enough data

Genome context

LSRX01000078.1: 519858-519945 [-]

Mature smc-miR-12455-5p

• Accession: MIMAT0050474
• Description: Symbiodinium microadriaticum smc-miR-12455-5p mature miRNA
• Sequence: 1 - CUGUGACCGUCCCAUCCUUGCG - 22
• Evidence: experimental ; Illumina [1]

Mature smc-miR-12455-2-3p

• Accession: MIMAT0050480
• Description: Symbiodinium microadriaticum smc-miR-12455-2-3p mature miRNA
• Sequence: 67 - CAAGGAUGGGAUGGUCAGAGAA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119094
   Integrating microRNA and mRNA expression profiling in Symbiodinium microadriaticum, a dinoflagellate symbiont of reef-building corals
   "Baumgarten S, Bayer T, Aranda M, Liew YJ, Carr A, Micklem G, Voolstra CR"
   "BMC Genomics (2013) 14:704