Stem-loop mdo-mir-12400

Accession

MI0040940

Description

Monodelphis domestica mdo-mir-12400 precursor miRNA

Sequence

3 reads, 0 reads per million, 3 experiments

cUGGGGGAGCUGCUCUCUGGGGUcccuuccaggccugaguccuggguucuaggagaggggcuuugggguggggugccaggaaggccccaggc
(((((...(((..((.((((.(((((((((((((((...((((((...))))))...)))).)))))).))))).)))))).))))))))..

Structure

--     GGA   GC  U    G     -      -    gag      g 
  cUGGG   GCU  UC CUGG GUccc uuccag gccu   uccugg  
  |||||   |||  || |||| ||||| |||||| ||||   |||||| u
  gaccc   cgg  ag gacc ugggg gggguu cggg   aggauc  
cg     ---   -a  -    g     u      u    gag      u 

Annotation confidence Not enough data

Genome context

NW_001583942.1: 157-248 [-]

Mature mdo-miR-12400-5p

• Accession: MIMAT0050374
• Description: Monodelphis domestica mdo-miR-12400-5p mature miRNA
• Sequence: 2 - UGGGGGAGCUGCUCUCUGGGGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973