Stem-loop mdo-mir-12370

Accession

MI0040901

Description

Monodelphis domestica mdo-mir-12370 precursor miRNA

Sequence

281 reads, 5 reads per million, 5 experiments

UUGGGGACAUUAGAAGUAGAAGCaaggucuaaccaagaggaaguauccguagccucaCUUCCCCUUCCUUGUCCCCACAGc
.((((((((...((((..((((..(((.(((.(.....(((....))))))))))..))))..))))..))))))))....

Structure

---U        UUA    UA    Ca   u   a caaga   a 
    UGGGGACA   GAAG  GAAG  agg cua c     gga g
    ||||||||   ||||  ||||  ||| ||| |     |||  
    ACCCCUGU   CUUC  CUUC  ucc gau g     ccu u
cGAC        -UC    CC    ac   -   - -----   a 

Annotation confidence Not enough data

Genome context

chr5: 295246729-295246809 [+]

Mature mdo-miR-12370-5p

• Accession: MIMAT0050306
• Description: Monodelphis domestica mdo-miR-12370-5p mature miRNA
• Sequence: 1 - UUGGGGACAUUAGAAGUAGAAGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12370-3p

• Accession: MIMAT0050307
• Description: Monodelphis domestica mdo-miR-12370-3p mature miRNA
• Sequence: 58 - CUUCCCCUUCCUUGUCCCCACAG - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973