Stem-loop mdo-mir-12335-2

Accession

MI0040840

Description

Monodelphis domestica mdo-mir-12335-2 precursor miRNA

Sequence

13 reads, 0 reads per million, 3 experiments

UUCAAAGCCAGCAUAACCCAuaacuggagccauuucgccagUUAUGGGUUAUGCUGGCUUUGa
.((((((((((((((((((((((((((.(......).))))))))))))))))))))))))))

Structure

U                          a cc 
 UCAAAGCCAGCAUAACCCAuaacugg g  a
 |||||||||||||||||||||||||| |   
 aGUUUCGGUCGUAUUGGGUAUUgacc c  u
-                          g uu 

Annotation confidence Not enough data

Genome context

chr3: 19324682-19324744 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-12335-2

Mature mdo-miR-12335-5p

• Accession: MIMAT0050200
• Description: Monodelphis domestica mdo-miR-12335-5p mature miRNA
• Sequence: 1 - UUCAAAGCCAGCAUAACCCA - 20
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12335-3p

• Accession: MIMAT0050201
• Description: Monodelphis domestica mdo-miR-12335-3p mature miRNA
• Sequence: 42 - UUAUGGGUUAUGCUGGCUUUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973