Stem-loop mdo-mir-12316

Accession

MI0040811

Description

Monodelphis domestica mdo-mir-12316 precursor miRNA

Sequence

98735 reads, 1716 reads per million, 5 experiments

UGGCCUCUGAGGUUCCUUCCAACUCcgacauucuguaauugguUUGAAAGGGAUCAGAGGUCAUU
((((((((((..((((((.(((..((((..........)))).))).))))))))))))))))..

Structure

--          GG      C   CU    cauu 
  UGGCCUCUGA  UUCCUU CAA  Ccga    c
  ||||||||||  |||||| |||  ||||     
  ACUGGAGACU  AGGGAA GUU  gguu    u
UU          --      A   -u    aaug 

Annotation confidence High

Genome context

chr1: 727221039-727221103 [-]

Mature mdo-miR-12316-5p

• Accession: MIMAT0050152
• Description: Monodelphis domestica mdo-miR-12316-5p mature miRNA
• Sequence: 1 - UGGCCUCUGAGGUUCCUUCCAACUC - 25
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12316-3p

• Accession: MIMAT0050153
• Description: Monodelphis domestica mdo-miR-12316-3p mature miRNA
• Sequence: 44 - UUGAAAGGGAUCAGAGGUCAUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973