Stem-loop mdo-mir-12311

Accession

MI0040804

Description

Monodelphis domestica mdo-mir-12311 precursor miRNA

Sequence

16 reads, 1 reads per million, 2 experiments

UGUGGGAGGGGACAAAGCUGUacuuaugaccuucaugaCCGCUUCUGUCCUUUUCUCCCCagc
((.(((((((((((((((.((...(((((...))))))).)))).))))))...)))))))..

Structure

--  U     ---      -    U  acu     c 
  UG GGGAG   GGGACA AAGC GU   uauga  
  || |||||   |||||| |||| ||   ||||| c
  aC CCCUC   UCCUGU UUCG Ca   guacu  
cg  -     UUU      C    C  ---     u 

Annotation confidence Not enough data

Genome context

chr1: 508387924-508387986 [-]

Mature mdo-miR-12311-5p

• Accession: MIMAT0050140
• Description: Monodelphis domestica mdo-miR-12311-5p mature miRNA
• Sequence: 1 - UGUGGGAGGGGACAAAGCUGU - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12311-3p

• Accession: MIMAT0050141
• Description: Monodelphis domestica mdo-miR-12311-3p mature miRNA
• Sequence: 39 - CCGCUUCUGUCCUUUUCUCCCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973