Stem-loop gga-mir-122b-1

Accession

MI0040772

Description

Gallus gallus gga-mir-122b-1 precursor miRNA

Literature search

16 open access papers mention gga-mir-122b-1
(86 sentences)

Sequence

5 reads, 0 reads per million, 2 experiments

UUUAGUGUGAUAAUGGCGUUUGauagauuggacacAAACACCAUUGUCACACUCCAua
...(((((((((((((.(((((............))))).))))))))))))).....

Structure

--UUU             C     auaga 
     AGUGUGAUAAUGG GUUUG     u
     ||||||||||||| |||||      
     UCACACUGUUACC CAAAc     u
auACC             A     acagg 

Annotation confidence Not enough data

Genome context

chrW: 2525199-2525256 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-122b-1

Mature gga-miR-122b-5p

• Accession: MIMAT0050092
• Description: Gallus gallus gga-miR-122b-5p mature miRNA
• Sequence: 1 - UUUAGUGUGAUAAUGGCGUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-122b-3p

• Accession: MIMAT0050093
• Description: Gallus gallus gga-miR-122b-3p mature miRNA
• Sequence: 36 - AAACACCAUUGUCACACUCCA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973