Stem-loop gga-mir-12283

Accession

MI0040755

Description

Gallus gallus gga-mir-12283 precursor miRNA

Sequence

25 reads, 0 reads per million, 4 experiments

UGGGGAGGAUAGGGAGAAAGGGUgcugcacguccccugggucuuaauUCUUCUCUCUGUCUUUCUCAGg
((((((((((((((((((((((.((.....)).))))............))))))))))))))))))..

Structure

--                  ------------    U  u 
  UGGGGAGGAUAGGGAGAA            AGGG gc g
  ||||||||||||||||||            |||| || c
  ACUCUUUCUGUCUCUCUU            uccc ug a
gG                  CUuaauucuggg    c  c 

Annotation confidence Not enough data

Genome context

chr9: 914529-914597 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-12283

Mature gga-miR-12283-5p

• Accession: MIMAT0050067
• Description: Gallus gallus gga-miR-12283-5p mature miRNA
• Sequence: 1 - UGGGGAGGAUAGGGAGAAAGGGU - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12283-3p

• Accession: MIMAT0050068
• Description: Gallus gallus gga-miR-12283-3p mature miRNA
• Sequence: 48 - UCUUCUCUCUGUCUUUCUCAG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973