Stem-loop gga-mir-12259

Accession

MI0040724

Description

Gallus gallus gga-mir-12259 precursor miRNA

Sequence

168 reads, 2 reads per million, 5 experiments

gUGCAGGUAGGCAGGGGGAGCAGGcugugugcugguugccuaccgUCUGCCUCUUUGUCUAUCUGCaga
.(((((((((((((((((.((((((.(((.((.....)).))).)))))))))))))))))))))))..

Structure

-g                 A      u   u  u 
  UGCAGGUAGGCAGGGGG GCAGGc gug gc g
  ||||||||||||||||| |||||| ||| || g
  aCGUCUAUCUGUUUCUC CGUCUg cau cg u
ag                 -      c   c  u 

Annotation confidence Not enough data

Genome context

chr3: 30349125-30349193 [+]

Mature gga-miR-12259-5p

• Accession: MIMAT0050009
• Description: Gallus gallus gga-miR-12259-5p mature miRNA
• Sequence: 2 - UGCAGGUAGGCAGGGGGAGCAGG - 24
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12259-3p

• Accession: MIMAT0050010
• Description: Gallus gallus gga-miR-12259-3p mature miRNA
• Sequence: 46 - UCUGCCUCUUUGUCUAUCUGC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973